| General summary |
|
| Average percent identity |
99.1 |
| Fraction of bases aligned |
1.0 |
| Mean read length |
1,969.2 |
| Mean read quality |
22.3 |
| Median percent identity |
99.2 |
| Median read length |
1,970.0 |
| Median read quality |
22.2 |
| Number of reads |
214,992.0 |
| Read length N50 |
1,970.0 |
| STDEV read length |
20.4 |
| Total bases |
423,363,364.0 |
| Total bases aligned |
423,041,993.0 |
| Number, percentage and megabases of reads above quality cutoffs |
|
| >Q10 |
214992 (100.0%) 423.4Mb |
| >Q15 |
214991 (100.0%) 423.4Mb |
| >Q20 |
214981 (100.0%) 423.4Mb |
| >Q25 |
28835 (13.4%) 56.8Mb |
| >Q30 |
1313 (0.6%) 2.6Mb |
| Top 5 highest mean basecall quality scores and their read lengths |
|
| 1 |
40.1 (1965; c392d76a-4863-468c-8d62-3228e4df2cb9) |
| 2 |
39.1 (1972; 8249b6fd-d5eb-45e5-9f90-4f634885fa56) |
| 3 |
38.0 (1967; 533b5404-8d73-4499-a820-a635d74f058a) |
| 4 |
37.9 (1973; ca2b5b28-2840-47a9-b0ed-dc92bf31f6b5) |
| 5 |
37.8 (1970; b76f9f09-9834-44d0-972e-421428bb84f6) |
| Top 5 longest reads and their mean basecall quality score |
|
| 1 |
2182 (25.8; dfa94a02-cf06-49b1-a057-7128c71e1d3b) |
| 2 |
2179 (21.0; 5a8acfe4-4b12-433f-873a-da8930c57d18) |
| 3 |
2166 (20.5; 95bb9e4e-8cf4-4c81-a56c-474d1f8617b4) |
| 4 |
2164 (20.7; 462b5d3e-a77c-4d66-9a2f-58872a367efb) |
| 5 |
2163 (21.2; e7233694-1f21-4afb-b499-cdbf9b140294) |